BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F04SP1|AL430572
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1696 1026 0.0
3x_Contig563 157 5e-38
3x_Contig1791 155 2e-37
3x_Contig1782 155 2e-37
3x_Contig1573 155 2e-37
3x_Contig1240 155 2e-37
3x_Contig1772 147 4e-35
>3x_Contig1696
Length = 16725
Score = 1026 bits (517), Expect = 0.0
Identities = 532/535 (99%), Gaps = 2/535 (0%)
Strand = Plus / Minus
Query: 1 gatctgactattagagttctttaaacagtacttgttgtaaatcagattttgaaccttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gatctgactattagagttctttaaacagtacttgttgtaaatcagattttgaaccttgat 476
Query: 61 tttacacaggagaaatttatgttgaaaatacaagtaaatattgttaactaaactttgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tttacacaggagaaatttatgttgaaaatacaagtaaatattgttaactaaactttgctt 416
Query: 121 tagagtctacgctgcgtctcttaactaaaaggctggctacaaaatatcgacctctattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tagagtctacgctgcgtctcttaactaaaaggctggctacaaaatatcgacctctattta 356
Query: 181 atatgggagaagacggtaaacatcacgcagactactcttcattccaaacaacagacagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atatgggagaagacggtaaacatcacgcagactactcttcattccaaacaacagacagga 296
Query: 241 aaaaagctctcgagcaactcttgatttcatatgaggctttagcagaaggtcaagacaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaaaagctctcgagcaactcttgatttcatatgaggctttagcagaaggtcaagacaact 236
Query: 301 gggtctgcaatctggcgaacgccgcatcattaatctggcattgttacatatcacttaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gggtctgcaatctggcgaacgccgcatcattaatctggcattgttacatatcacttaatg 176
Query: 361 ttgacgttaactgggctgggttctacctcactcggagagagaataaaa-magagttgatt 419
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 175 ttgacgttaactgggctgggttctacctcactcggagagagaataaaataagagttgatt 116
Query: 420 cttgggccatttcaaggcaaagttgcttgtcagttgattcaatttggtaaaggagtgtgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 cttgggccatttcaaggcaaagttgcttgtcagttgattcaatttggtaaaggagtgtgt 56
Query: 480 ggtactgctgcgtctagtcaacaaactcaattagtacca-gatgttgaaaacttc 533
||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 55 ggtactgctgcgtctagtcaacaaactcaattagtaccaggatgttgaaaacttc 1
>3x_Contig563
Length = 1285
Score = 157 bits (79), Expect = 5e-38
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 863 aaaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataac 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataac 629
Query: 923 cgactagaccacgaaacca 941
|||||||||||||||||||
Sbjct: 628 cgactagaccacgaaacca 610
>3x_Contig1791
Length = 39945
Score = 155 bits (78), Expect = 2e-37
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 864 aaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataacc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16735 aaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataacc 16676
Query: 924 gactagaccacgaaacca 941
||||||||||||||||||
Sbjct: 16675 gactagaccacgaaacca 16658
>3x_Contig1782
Length = 24703
Score = 155 bits (78), Expect = 2e-37
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 864 aaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataacc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24338 aaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataacc 24279
Query: 924 gactagaccacgaaacca 941
||||||||||||||||||
Sbjct: 24278 gactagaccacgaaacca 24261
>3x_Contig1573
Length = 10819
Score = 155 bits (78), Expect = 2e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 864 aaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataacc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7051 aaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataacc 7110
Query: 924 gactagaccacgaaacca 941
||||||||||||||||||
Sbjct: 7111 gactagaccacgaaacca 7128
>3x_Contig1240
Length = 5468
Score = 155 bits (78), Expect = 2e-37
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 864 aaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataacc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 aaatgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataacc 1032
Query: 924 gactagaccacgaaacca 941
||||||||||||||||||
Sbjct: 1031 gactagaccacgaaacca 1014
>3x_Contig1772
Length = 25851
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 867 tgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataaccgac 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11780 tgatttcgcccaggatcgaactggggacgttctgcgtgttaagcagatgccataaccgac 11839
Query: 927 tagaccacgaaacc 940
||||||||||||||
Sbjct: 11840 tagaccacgaaacc 11853
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6381
Number of Sequences: 1807
Number of extensions: 6381
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 7
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)